MLOC_34660 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains47.635157.329658.611954.5803
LEAShoots from the seedlings (10 cm shoot stage)54.716238.89539.12438.404
INF1Young developing inflorescences (5mm)45.99647.814840.887337.1683
INF2Developing inflorescences (1-1.5 cm)37.451341.746841.411643.8842
ROORoots from the seedlings (10 cm shoot stage)46.230568.003966.47279.0636
NODDeveloping tillers at six leaf stage, 3rd internode66.678650.318839.6772171.076
CAR5Developing grain, bracts removed (5 DPA)45.837245.533243.096943.553
CAR15Developing grain, bracts removed (15 DPA)10.79169.7743911.302523.6085



CDS Structure of MLOC_34660






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34660.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK251739.1NoneNoneNoneNone
MLOC_34660.2CUST_2196_PI427708080AvailableAvailablecontig_244333 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g46510.1 -1 0.0 824 432/438 (99%) 13102.m05223 protein adaptor complexes medium subunit family domain containing protein, expressed
TAIR PP10 AT5G46630.1 -1 0.0 792 408/438 (93%) Clathrin adaptor complexes medium subunit family protein | chr5:18920580-18923252 FORWARD LENGTH=438