MLOC_34646 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.2464230.1587680.1106370.199712
LEAShoots from the seedlings (10 cm shoot stage)0.3284060.2978260.1450130.278936
INF1Young developing inflorescences (5mm)0.2001390.1521780.08508990.145097
INF2Developing inflorescences (1-1.5 cm)000.04183570.0409596
ROORoots from the seedlings (10 cm shoot stage)1.155350.7453540.6799861.18324
NODDeveloping tillers at six leaf stage, 3rd internode0.8164360.4613250.02329881.38198
CAR5Developing grain, bracts removed (5 DPA)0.2424030.1506950.1194970.205113
CAR15Developing grain, bracts removed (15 DPA)0.0303999000.108489



CDS Structure of MLOC_34646






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34646.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34646.1CUST_11195_PI427708080AvailableAvailablecontig_244314 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g41510.1 -2 3e-109 323 177/260 (68%) 13102.m04580 protein MYB family transcription factor, putative, expressed
TAIR PP10 AT1G06180.1 -2 1e-74 234 125/234 (53%) | Symbols: ATMYB13, ATMYBLFGN, MYB13 | myb domain protein 13 | chr1:1889510-1891089 FORWARD LENGTH=246