- Predicted Gene MLOC_34604
MLOC_34604 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_34604_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_34604_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 2.55723 | 2.27517 | 2.54587 | 2.23241 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.78504 | 1.83141 | 2.37656 | 1.46003 |
INF1 | Young developing inflorescences (5mm) | 3.99838 | 4.71051 | 5.2154 | 3.64675 |
INF2 | Developing inflorescences (1-1.5 cm) | 4.26186 | 5.71527 | 4.87146 | 5.14683 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.57031 | 2.50649 | 2.71545 | 2.51237 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.24941 | 1.52141 | 2.45258 | 4.40126 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.94962 | 4.08305 | 4.09335 | 3.64312 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.20211 | 1.79915 | 1.72923 | 3.44622 |
CDS Structure of MLOC_34604
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34604.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g31340.1 |
+1 |
1e-117 |
363 |
223/469 (48%) |
13112.m03190 protein OsFBD15 - F-box and FBD domain containing protein, expressed |
TAIR PP10 |
AT2G29930.3 |
+1 |
9e-13 |
71 |
69/245 (28%) |
F-box/RNI-like superfamily protein | chr2:12756457-12758087 REVERSE LENGTH=459 |