MLOC_34604 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.557232.275172.545872.23241
LEAShoots from the seedlings (10 cm shoot stage)1.785041.831412.376561.46003
INF1Young developing inflorescences (5mm)3.998384.710515.21543.64675
INF2Developing inflorescences (1-1.5 cm)4.261865.715274.871465.14683
ROORoots from the seedlings (10 cm shoot stage)2.570312.506492.715452.51237
NODDeveloping tillers at six leaf stage, 3rd internode1.249411.521412.452584.40126
CAR5Developing grain, bracts removed (5 DPA)3.949624.083054.093353.64312
CAR15Developing grain, bracts removed (15 DPA)1.202111.799151.729233.44622



CDS Structure of MLOC_34604






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34604.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363850NoneNoneNoneNone
MLOC_34604.1CUST_2189_PI427708080AvailableAvailablecontig_244235 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g31340.1 +1 1e-117 363 223/469 (48%) 13112.m03190 protein OsFBD15 - F-box and FBD domain containing protein, expressed
TAIR PP10 AT2G29930.3 +1 9e-13 71 69/245 (28%) F-box/RNI-like superfamily protein | chr2:12756457-12758087 REVERSE LENGTH=459