MLOC_34595 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains36.042244.30839.291541.8758
LEAShoots from the seedlings (10 cm shoot stage)68.834131.364736.327242.1845
INF1Young developing inflorescences (5mm)63.543255.226859.134148.8552
INF2Developing inflorescences (1-1.5 cm)42.638747.251147.231751.0192
ROORoots from the seedlings (10 cm shoot stage)7.1648517.181215.265520.4613
NODDeveloping tillers at six leaf stage, 3rd internode31.419434.11239.8141134.161
CAR5Developing grain, bracts removed (5 DPA)45.774942.256448.241445.2273
CAR15Developing grain, bracts removed (15 DPA)23.634321.377621.086149.8628



CDS Structure of MLOC_34595






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK249251.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249251.1CUST_18668_PI427708080NoneNoneNone
MLOC_34595.1NoneAvailableAvailablecontig_244216 (Mapped)
MLOC_47861.1NoneAvailableNonecontig_31350 (Not mapped)
MLOC_55608.1NoneAvailableNonecontig_40106 (Mapped)
MLOC_79760.1NoneAvailableNonecontig_86837 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----