MLOC_34594 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains13.181211.039910.424915.3115
LEAShoots from the seedlings (10 cm shoot stage)8.87614.825114.945614.4034
INF1Young developing inflorescences (5mm)10.584212.988812.497913.6248
INF2Developing inflorescences (1-1.5 cm)12.074410.336212.306416.839
ROORoots from the seedlings (10 cm shoot stage)11.761813.432717.927925.0695
NODDeveloping tillers at six leaf stage, 3rd internode22.735217.919.89971.6604
CAR5Developing grain, bracts removed (5 DPA)8.964629.548288.5529712.7997
CAR15Developing grain, bracts removed (15 DPA)6.161856.584385.1889819.2145



CDS Structure of MLOC_34594






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34594.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK376888NoneNoneNoneNone
MLOC_34594.2CUST_2188_PI427708080AvailableAvailablecontig_244216 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os10g35000.1 +3 1e-36 130 93/115 (81%) 13110.m03126 protein G-patch domain containing protein, expressed
TAIR PP10 AT5G08535.2 +3 1e-21 89 62/119 (52%) D111/G-patch domain-containing protein | chr5:2762722-2763320 FORWARD LENGTH=116