MLOC_34570 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.1857270.1815200.197379
LEAShoots from the seedlings (10 cm shoot stage)72.207940.985866.708244.9844
INF1Young developing inflorescences (5mm)0.09261240.1819050.3362220.138383
INF2Developing inflorescences (1-1.5 cm)0.6663651.007110.5030020.694424
ROORoots from the seedlings (10 cm shoot stage)0.1542774.506470.3160143.16326
NODDeveloping tillers at six leaf stage, 3rd internode1.645640.54620302.17135
CAR5Developing grain, bracts removed (5 DPA)00.16400300.146235
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_34570






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34570.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34570.1CUST_4864_PI427708083AvailableAvailablecontig_244186 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g32240.1 -2 6e-46 155 79/120 (66%) 13112.m03290 protein eukaryotic translation initiation factor 5A, putative, expressed
TAIR PP10 AT1G69410.1 -2 2e-44 150 76/120 (63%) | Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158