- Predicted Gene MLOC_34570
MLOC_34570 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_34570_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_34570_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.185727 | 0.18152 | 0 | 0.197379 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 72.2079 | 40.9858 | 66.7082 | 44.9844 |
INF1 | Young developing inflorescences (5mm) | 0.0926124 | 0.181905 | 0.336222 | 0.138383 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.666365 | 1.00711 | 0.503002 | 0.694424 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.154277 | 4.50647 | 0.316014 | 3.16326 |
NOD | Developing tillers at six leaf stage, 3rd internode | 1.64564 | 0.546203 | 0 | 2.17135 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0 | 0.164003 | 0 | 0.146235 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_34570
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34570.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g32240.1 |
-2 |
6e-46 |
155 |
79/120 (66%) |
13112.m03290 protein eukaryotic translation initiation factor 5A, putative, expressed |
TAIR PP10 |
AT1G69410.1 |
-2 |
2e-44 |
150 |
76/120 (63%) |
| Symbols: ATELF5A-3, ELF5A-3 | eukaryotic elongation factor 5A-3 | chr1:26089301-26090194 FORWARD LENGTH=158 |