MLOC_34569 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains33.400719.105921.389322.8559
LEAShoots from the seedlings (10 cm shoot stage)8.311781.408012.404933.54925
INF1Young developing inflorescences (5mm)51.206754.725250.748842.1052
INF2Developing inflorescences (1-1.5 cm)28.389536.12636.031835.1521
ROORoots from the seedlings (10 cm shoot stage)9.4271714.552716.336216.2383
NODDeveloping tillers at six leaf stage, 3rd internode00.2143730.2554921.04287
CAR5Developing grain, bracts removed (5 DPA)23.063223.988621.145421.6525
CAR15Developing grain, bracts removed (15 DPA)1.297981.043071.262832.67368



CDS Structure of MLOC_34569






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34569.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34569.1CUST_4863_PI427708083AvailableAvailablecontig_244186 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g56130.1 +2 1e-122 357 180/185 (97%) 13102.m06448 protein PCNA - Putative DNA replicative polymerase clamp, expressed
TAIR PP10 AT2G29570.1 +2 3e-110 324 160/184 (87%) | Symbols: PCNA2, ATPCNA2 | proliferating cell nuclear antigen 2 | chr2:12650139-12651598 REVERSE LENGTH=264