- Predicted Gene MLOC_34569
MLOC_34569 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 33.4007 | 19.1059 | 21.3893 | 22.8559 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 8.31178 | 1.40801 | 2.40493 | 3.54925 |
INF1 | Young developing inflorescences (5mm) | 51.2067 | 54.7252 | 50.7488 | 42.1052 |
INF2 | Developing inflorescences (1-1.5 cm) | 28.3895 | 36.126 | 36.0318 | 35.1521 |
ROO | Roots from the seedlings (10 cm shoot stage) | 9.42717 | 14.5527 | 16.3362 | 16.2383 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0 | 0.214373 | 0.255492 | 1.04287 |
CAR5 | Developing grain, bracts removed (5 DPA) | 23.0632 | 23.9886 | 21.1454 | 21.6525 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.29798 | 1.04307 | 1.26283 | 2.67368 |
CDS Structure of MLOC_34569
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34569.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g56130.1 |
+2 |
1e-122 |
357 |
180/185 (97%) |
13102.m06448 protein PCNA - Putative DNA replicative polymerase clamp, expressed |
TAIR PP10 |
AT2G29570.1 |
+2 |
3e-110 |
324 |
160/184 (87%) |
| Symbols: PCNA2, ATPCNA2 | proliferating cell nuclear antigen 2 | chr2:12650139-12651598 REVERSE LENGTH=264 |