MLOC_34565 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.661986.801367.343686.70954
LEAShoots from the seedlings (10 cm shoot stage)31.09821.218926.314722.7797
INF1Young developing inflorescences (5mm)4.603844.797524.367823.70317
INF2Developing inflorescences (1-1.5 cm)4.489244.609654.654754.86991
ROORoots from the seedlings (10 cm shoot stage)10.91811.352911.868413.705
NODDeveloping tillers at six leaf stage, 3rd internode11.28812.44719.96546.8534
CAR5Developing grain, bracts removed (5 DPA)6.913096.458728.330276.58526
CAR15Developing grain, bracts removed (15 DPA)1.014321.656141.39262.80157



CDS Structure of MLOC_34565






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34565.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34565.4CUST_11177_PI427708080AvailableAvailablecontig_244176 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g01360.1 +1 0.0 881 484/735 (66%) 13112.m00045 protein expressed protein
TAIR PP10 AT2G29970.1 +1 5e-43 170 197/744 (26%) Double Clp-N motif-containing P-loop nucleoside triphosphate hydrolases superfamily protein | chr2:12776601-12779784 FORWARD LENGTH=1002