- Predicted Gene MLOC_34557
MLOC_34557 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 29.8359 | 61.654 | 52.5557 | 49.3299 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 49.0654 | 55.8195 | 39.2273 | 39.471 |
| INF1 | Young developing inflorescences (5mm) | 52.1354 | 53.6427 | 55.0912 | 43.1794 |
| INF2 | Developing inflorescences (1-1.5 cm) | 53.7626 | 51.9441 | 48.475 | 54.0669 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 29.0194 | 62.7798 | 43.0028 | 63.4039 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 24.8501 | 29.1771 | 27.7093 | 89.7435 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 54.8696 | 50.3973 | 51.8533 | 47.9662 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 6.78321 | 6.62979 | 7.15655 | 15.0466 |
CDS Structure of MLOC_34557
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34557.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os12g39660.1 |
-2 |
0.0 |
1797 |
921/1017 (91%) |
13112.m04120 protein calcium-transporting ATPase, plasma membrane-type, putative, expressed |
| TAIR PP10 |
AT1G27770.1 |
-2 |
0.0 |
1505 |
771/1016 (76%) |
| Symbols: ACA1, PEA1 | autoinhibited Ca2+-ATPase 1 | chr1:9671912-9676010 REVERSE LENGTH=1020 |