- Predicted Gene MLOC_34539
MLOC_34539 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 5.53028 | 8.62069 | 7.48682 | 8.14216 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 10.4461 | 12.2278 | 10.6045 | 9.83557 |
| INF1 | Young developing inflorescences (5mm) | 10.0778 | 10.856 | 13.8484 | 10.0719 |
| INF2 | Developing inflorescences (1-1.5 cm) | 20.1323 | 19.758 | 23.0063 | 23.3661 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 7.54667 | 9.87854 | 10.4098 | 12.2106 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 2.87081 | 5.1028 | 7.73381 | 18.1087 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 12.5071 | 12.203 | 12.2796 | 12.4935 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 4.15058 | 3.40872 | 3.97771 | 9.2587 |
CDS Structure of MLOC_34539
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34539.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os01g18850.4 |
-2 |
0.0 |
1008 |
576/880 (65%) |
13101.m02045 protein OsSPL1 - SBP-box gene family member, expressed |
| TAIR PP10 |
AT3G60030.1 |
-2 |
7e-119 |
395 |
237/556 (43%) |
| Symbols: SPL12 | squamosa promoter-binding protein-like 12 | chr3:22165856-22169410 REVERSE LENGTH=927 |