- Predicted Gene MLOC_34538
MLOC_34538 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 0.0659395 | 0.105932 | 0.0690174 | 0.0939032 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 1.1292 | 1.67892 | 1.89879 | 1.17805 |
INF1 | Young developing inflorescences (5mm) | 0.846694 | 0.659559 | 0.831785 | 0.694456 |
INF2 | Developing inflorescences (1-1.5 cm) | 0.681127 | 0.791407 | 0.489933 | 0.777262 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.381593 | 0.45389 | 0.267129 | 0.485204 |
NOD | Developing tillers at six leaf stage, 3rd internode | 0.493816 | 0.788902 | 0.566886 | 1.65542 |
CAR5 | Developing grain, bracts removed (5 DPA) | 0.413335 | 0.345579 | 0.434179 | 0.408255 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.132192 | 0.119027 | 0.0946367 | 0.330209 |
CDS Structure of MLOC_34538
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34538.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g10470.1 |
+3 |
1e-25 |
102 |
57/100 (57%) |
13101.m01132 protein RALFL17 - Rapid ALkalinization Factor RALF family protein precursor, expressed |
TAIR PP10 |
AT4G15800.1 |
+3 |
2e-14 |
69 |
40/84 (48%) |
| Symbols: RALFL33 | ralf-like 33 | chr4:8984915-8985265 FORWARD LENGTH=116 |