MLOC_34537 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains9.0903417.351214.007513.5219
LEAShoots from the seedlings (10 cm shoot stage)12.804113.374912.032710.4522
INF1Young developing inflorescences (5mm)24.137920.236817.298216.5563
INF2Developing inflorescences (1-1.5 cm)28.104230.524727.435529.9838
ROORoots from the seedlings (10 cm shoot stage)7.9251616.228513.313616.54
NODDeveloping tillers at six leaf stage, 3rd internode2.091963.145035.3116311.2191
CAR5Developing grain, bracts removed (5 DPA)34.49831.140433.976330.0488
CAR15Developing grain, bracts removed (15 DPA)18.129417.998313.873737.077



CDS Structure of MLOC_34537






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34537.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK363409NoneNoneNoneNone
MLOC_34537.1CUST_17991_PI427708080AvailableAvailablecontig_244126 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g18380.3 -3 0.0 1774 896/1008 (89%) 13103.m02203 protein ubiquitin-activating enzyme, putative, expressed
TAIR PP10 AT2G30110.1 -3 0.0 1480 729/1008 (72%) | Symbols: ATUBA1, MOS5, UBA1 | ubiquitin-activating enzyme 1 | chr2:12852632-12857369 REVERSE LENGTH=1080