MLOC_34513 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.3846190.7352710.3667730.656113
LEAShoots from the seedlings (10 cm shoot stage)0.06621180.07641110.03554310.0539508
INF1Young developing inflorescences (5mm)0.6724490.928541.066010.895656
INF2Developing inflorescences (1-1.5 cm)3.936244.710573.61015.38951
ROORoots from the seedlings (10 cm shoot stage)0.4722760.2923780.2900190.414658
NODDeveloping tillers at six leaf stage, 3rd internode0.05799170.06578380.005882590.182457
CAR5Developing grain, bracts removed (5 DPA)0.06192860.038933900.0569536
CAR15Developing grain, bracts removed (15 DPA)000.02285990.0506638



CDS Structure of MLOC_34513






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34513.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34513.2CUST_11171_PI427708080AvailableAvailablecontig_244082 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g38800.1 -1 0.0 536 290/470 (62%) 13103.m04212 protein AAA family ATPase, putative, expressed
TAIR PP10 AT3G50940.1 -1 6e-102 321 175/409 (43%) P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr3:18934086-18935528 FORWARD LENGTH=451