- Predicted Gene MLOC_34508
MLOC_34508 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_34508_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_34508_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 451.135 | 382.342 | 352.547 | 423.567 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 244.841 | 96.3885 | 103.139 | 136.323 |
INF1 | Young developing inflorescences (5mm) | 522.821 | 480.769 | 533.07 | 452.559 |
INF2 | Developing inflorescences (1-1.5 cm) | 342.158 | 283.595 | 322.566 | 359.011 |
ROO | Roots from the seedlings (10 cm shoot stage) | 186.068 | 278.23 | 316.878 | 360.57 |
NOD | Developing tillers at six leaf stage, 3rd internode | 30.6312 | 23.2788 | 66.2702 | 111.555 |
CAR5 | Developing grain, bracts removed (5 DPA) | 151.772 | 149.152 | 144.859 | 156.223 |
CAR15 | Developing grain, bracts removed (15 DPA) | 81.0413 | 81.6908 | 75.6957 | 188.524 |
CDS Structure of MLOC_34508
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34508.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g44450.2 |
-1 |
2e-124 |
360 |
196/216 (91%) |
13108.m04827 protein L1P family of ribosomal proteins domain containing protein, expressed |
TAIR PP10 |
AT2G27530.2 |
-1 |
1e-117 |
342 |
186/216 (86%) |
| Symbols: PGY1 | Ribosomal protein L1p/L10e family | chr2:11763443-11764570 REVERSE LENGTH=216 |