MLOC_34499 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains7.1834414.406112.645510.4346
LEAShoots from the seedlings (10 cm shoot stage)4.889150.732411.026891.97134
INF1Young developing inflorescences (5mm)37.241734.895131.265125.3168
INF2Developing inflorescences (1-1.5 cm)27.47130.824823.294126.8959
ROORoots from the seedlings (10 cm shoot stage)3.089137.112265.260496.5084
NODDeveloping tillers at six leaf stage, 3rd internode0.263110.2148760.205310.656486
CAR5Developing grain, bracts removed (5 DPA)14.070614.763315.572212.2708
CAR15Developing grain, bracts removed (15 DPA)0.8946780.7539521.085921.68222



CDS Structure of MLOC_34499






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34499.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34499.1CUST_11166_PI427708080AvailableAvailablecontig_244050 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g24550.1 +2 0.0 2193 1145/1345 (85%) 13112.m02491 protein expressed protein
TAIR PP10 AT1G50240.2 +2 0.0 1232 683/1340 (51%) | Symbols: FU | Protein kinase family protein with ARM repeat domain | chr1:18607063-18614094 FORWARD LENGTH=1322