MLOC_34498 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains18.37617.831618.94718.6165
LEAShoots from the seedlings (10 cm shoot stage)15.163615.943218.07514.2809
INF1Young developing inflorescences (5mm)29.609327.897726.936223.8779
INF2Developing inflorescences (1-1.5 cm)29.270729.571833.157333.1455
ROORoots from the seedlings (10 cm shoot stage)19.58721.499119.77825.9683
NODDeveloping tillers at six leaf stage, 3rd internode11.508311.471816.616241.1743
CAR5Developing grain, bracts removed (5 DPA)22.629124.044823.29123.0147
CAR15Developing grain, bracts removed (15 DPA)12.178610.79511.488626.535



CDS Structure of MLOC_34498






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34498.4
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34498.4CUST_11165_PI427708080AvailableAvailablecontig_244047 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g01070.2 +2 3e-137 409 222/333 (67%) 13101.m00013 protein expressed protein
TAIR PP10 AT1G24265.2 +2 6e-42 156 97/262 (37%) Protein of unknown function (DUF1664) | chr1:8600613-8603630 FORWARD LENGTH=348