MLOC_34493 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6714140.6172831.214650.775174
LEAShoots from the seedlings (10 cm shoot stage)0000
INF1Young developing inflorescences (5mm)0.04495850.049840.05480950.0453768
INF2Developing inflorescences (1-1.5 cm)0.04624090.043337400.0643596
ROORoots from the seedlings (10 cm shoot stage)0.114471000.0522439
NODDeveloping tillers at six leaf stage, 3rd internode00.008850980.02956920.0695134
CAR5Developing grain, bracts removed (5 DPA)1.319721.923090.8345941.39208
CAR15Developing grain, bracts removed (15 DPA)307.115304.578280.007753.818



CDS Structure of MLOC_34493






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34493.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34493.1CUST_11163_PI427708080AvailableAvailablecontig_244038 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g12080.1 +1 2e-25 101 52/105 (50%) 13107.m01242 protein LTPL169 - Protease inhibitor/seed storage/LTP family protein precursor, expressed
TAIR PP10None-----