MLOC_34486 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.184951.417691.622991.27525
LEAShoots from the seedlings (10 cm shoot stage)3.812842.940482.762.70084
INF1Young developing inflorescences (5mm)10.49497.681045.853326.47493
INF2Developing inflorescences (1-1.5 cm)7.127696.720257.404237.29501
ROORoots from the seedlings (10 cm shoot stage)1.568512.906482.645043.02583
NODDeveloping tillers at six leaf stage, 3rd internode7.770299.3383912.657833.2359
CAR5Developing grain, bracts removed (5 DPA)4.65154.524494.28934.08553
CAR15Developing grain, bracts removed (15 DPA)4.028514.153734.002438.32043



CDS Structure of MLOC_34486






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34486.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34486.1NoneAvailableAvailablecontig_244014 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g20380.7 -3 2e-115 362 174/212 (82%) 13103.m02445 protein CAMK_KIN1/SNF1/Nim1_like.2 - CAMK includes calcium/calmodulin depedent protein kinases, expressed
TAIR PP10 AT5G21326.1 -3 1e-79 268 126/205 (61%) Ca2+regulated serine-threonine protein kinase family protein | chr5:7218081-7221743 FORWARD LENGTH=439