MLOC_34483 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains24.421718.551418.362921.5362
LEAShoots from the seedlings (10 cm shoot stage)13.718417.180520.75615.6312
INF1Young developing inflorescences (5mm)27.075531.551831.848628.5495
INF2Developing inflorescences (1-1.5 cm)22.706525.519224.828629.374
ROORoots from the seedlings (10 cm shoot stage)32.646225.477225.471933.932
NODDeveloping tillers at six leaf stage, 3rd internode13.243220.723943.394186.8963
CAR5Developing grain, bracts removed (5 DPA)27.489633.873225.16232.1236
CAR15Developing grain, bracts removed (15 DPA)5.806025.204423.9680613.2893



CDS Structure of MLOC_34483






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34483.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK372114NoneNoneNoneNone
MLOC_34483.1CUST_2172_PI427708080AvailableAvailablecontig_244012 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g05260.1 -3 5e-106 313 156/210 (74%) 13103.m00551 protein ankyrin repeat domain containing protein, expressed
TAIR PP10 AT3G09890.1 -3 3e-72 226 111/197 (56%) Ankyrin repeat family protein | chr3:3032678-3034158 FORWARD LENGTH=206