MLOC_3448 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 13.959 | 14.6612 | 15.3626 | 12.7126 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 21.7931 | 22.6871 | 24.9996 | 17.8218 |
| INF1 | Young developing inflorescences (5mm) | 17.0282 | 18.4903 | 24.5458 | 13.812 |
| INF2 | Developing inflorescences (1-1.5 cm) | 23.4279 | 21.426 | 23.5214 | 21.536 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 16.3775 | 24.8527 | 18.4068 | 24.0502 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 18.7523 | 23.2464 | 37.2626 | 80.0233 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 17.8474 | 14.8655 | 17.3655 | 13.8714 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 12.4569 | 11.6509 | 9.86427 | 22.5528 |
CDS Structure of MLOC_3448
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3448.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os06g15700.1 |
-1 |
8e-164 |
514 |
286/343 (83%) |
13106.m01735 protein expressed protein |
| TAIR PP10 |
AT3G19190.1 |
-1 |
9e-81 |
278 |
158/288 (55%) |
| Symbols: ATATG2, ATG2 | autophagy 2 | chr3:6639879-6648274 FORWARD LENGTH=1839 |