MLOC_3447 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.102450.5807432.709480
LEAShoots from the seedlings (10 cm shoot stage)2.115686.57930.924060
INF1Young developing inflorescences (5mm)5.361562.933722.869070
INF2Developing inflorescences (1-1.5 cm)4.221222.549752.486930
ROORoots from the seedlings (10 cm shoot stage)00.6157622.012870
NODDeveloping tillers at six leaf stage, 3rd internode0.9981913.623173.829140
CAR5Developing grain, bracts removed (5 DPA)1.25110.5463131.970630
CAR15Developing grain, bracts removed (15 DPA)0.5926261.2354600



CDS Structure of MLOC_3447






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK353908
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK353908CUST_23631_PI427708080NoneNoneNone
MLOC_26703.2NoneAvailableNonecontig_1773895 (Not mapped)
MLOC_26777.1NoneAvailableAvailablecontig_1779321 (Not mapped)
MLOC_3447.1NoneAvailableNonecontig_130905 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----