MLOC_34430 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains19.408827.488923.279428.4575
LEAShoots from the seedlings (10 cm shoot stage)18.818819.900514.027916.7067
INF1Young developing inflorescences (5mm)49.944955.152453.323549.7593
INF2Developing inflorescences (1-1.5 cm)51.237149.474248.008659.2473
ROORoots from the seedlings (10 cm shoot stage)20.215330.22826.213741.4146
NODDeveloping tillers at six leaf stage, 3rd internode11.042513.067915.371151.0827
CAR5Developing grain, bracts removed (5 DPA)28.263531.057730.791532.9457
CAR15Developing grain, bracts removed (15 DPA)7.806499.431466.9013821.0443



CDS Structure of MLOC_34430






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34430.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252144.1NoneNoneNoneNone
MLOC_34430.1CUST_2166_PI427708080AvailableAvailablecontig_243868 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g19870.3 -1 2e-163 478 339/391 (87%) 13103.m02382 protein ATP binding protein, putative, expressed
TAIR PP10 AT4G21800.2 -1 3e-133 399 242/328 (74%) | Symbols: QQT2 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr4:11573289-11574976 FORWARD LENGTH=379