MLOC_34375 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6159110.4545660.3897180.493352
LEAShoots from the seedlings (10 cm shoot stage)0.6115431.086952.320711.05114
INF1Young developing inflorescences (5mm)0.1283310.1358940.1167190.119872
INF2Developing inflorescences (1-1.5 cm)000.04763860.0726682
ROORoots from the seedlings (10 cm shoot stage)0.9197930.4975810.5114740.586119
NODDeveloping tillers at six leaf stage, 3rd internode0.0626270.016578900.0339907
CAR5Developing grain, bracts removed (5 DPA)1.369591.789091.685151.7721
CAR15Developing grain, bracts removed (15 DPA)00.019725600.0781486



CDS Structure of MLOC_34375






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34375.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK355522NoneNoneNoneNone
MLOC_34375.1CUST_2163_PI427708080AvailableAvailablecontig_243680 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g42570.1 +2 0.0 584 331/479 (69%) 13108.m04593 protein plant protein of unknown function domain containing protein, expressed
TAIR PP10 AT3G50130.1 +2 4e-41 157 128/465 (28%) Plant protein of unknown function (DUF247) | chr3:18589111-18591222 REVERSE LENGTH=564