- Predicted Gene MLOC_34374
MLOC_34374 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_34374_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_34374_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 58.3171 | 64.7194 | 55.1328 | 64.7178 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 45.3571 | 35.3308 | 29.9958 | 33.3873 |
INF1 | Young developing inflorescences (5mm) | 112.497 | 111.061 | 116.923 | 100.174 |
INF2 | Developing inflorescences (1-1.5 cm) | 119.023 | 117.348 | 109.22 | 131.521 |
ROO | Roots from the seedlings (10 cm shoot stage) | 42.0251 | 62.4272 | 50.2993 | 76.3283 |
NOD | Developing tillers at six leaf stage, 3rd internode | 8.26811 | 15.0423 | 49.9927 | 73.7139 |
CAR5 | Developing grain, bracts removed (5 DPA) | 89.7284 | 86.4457 | 89.1087 | 90.2905 |
CAR15 | Developing grain, bracts removed (15 DPA) | 37.0757 | 35.8597 | 29.7412 | 84.0647 |
CDS Structure of MLOC_34374
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34374.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os08g42560.1 |
+2 |
0.0 |
1258 |
632/676 (93%) |
13108.m04592 protein tRNA synthetase class II core domain containing protein, expressed |
TAIR PP10 |
AT1G29880.1 |
+2 |
0.0 |
1055 |
521/672 (78%) |
glycyl-tRNA synthetase / glycine--tRNA ligase | chr1:10459662-10462781 REVERSE LENGTH=729 |