MLOC_3433 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.6711171.754611.651470.97409
LEAShoots from the seedlings (10 cm shoot stage)3.49951.270242.288351.70516
INF1Young developing inflorescences (5mm)6.231766.921946.385253.68604
INF2Developing inflorescences (1-1.5 cm)5.62946.193893.661234.50707
ROORoots from the seedlings (10 cm shoot stage)0.3210380.763470.3323740.589961
NODDeveloping tillers at six leaf stage, 3rd internode1.527221.091751.446493.07895
CAR5Developing grain, bracts removed (5 DPA)0.7365240.5782590.5771250.456432
CAR15Developing grain, bracts removed (15 DPA)0.8015820.1956430.1474060.953468



CDS Structure of MLOC_3433






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK374884
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK374884CUST_22733_PI427708080NoneNoneNone
MLOC_25062.1NoneAvailableNonecontig_1668648 (Mapped)
MLOC_30480.1NoneAvailableNonecontig_2101822 (Not mapped)
MLOC_30967.1NoneAvailableNonecontig_214406 (Mapped)
MLOC_30968.2NoneAvailableNonecontig_214406 (Mapped)
MLOC_31135.1NoneAvailableNonecontig_216023 (Mapped)
MLOC_3433.3NoneAvailableAvailablecontig_130818 (Mapped)
MLOC_40675.1NoneAvailableNonecontig_2562853 (Mapped)
MLOC_40676.2NoneAvailableNonecontig_2562853 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----