MLOC_34277 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.163974.667734.565770
LEAShoots from the seedlings (10 cm shoot stage)17.7257.113872.952430
INF1Young developing inflorescences (5mm)31.880120.93839.85020
INF2Developing inflorescences (1-1.5 cm)51.832262.932136.32740
ROORoots from the seedlings (10 cm shoot stage)015.41153.398230
NODDeveloping tillers at six leaf stage, 3rd internode1.841296.0707210.85250
CAR5Developing grain, bracts removed (5 DPA)15.003819.963917.85880
CAR15Developing grain, bracts removed (15 DPA)1.805223.864267.143150



CDS Structure of MLOC_34277






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by AK367944
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK367944CUST_25179_PI427708080NoneNoneNone
MLOC_20085.1NoneAvailableAvailablecontig_1587958 (Mapped)
MLOC_22748.1NoneAvailableNonecontig_161140 (Mapped)
MLOC_23273.1NoneAvailableNonecontig_16200 (Mapped)
MLOC_2420.2NoneAvailableNonecontig_1215070 (Not mapped)
MLOC_24572.1NoneAvailableNonecontig_1647934 (Mapped)
MLOC_27420.1NoneAvailableNonecontig_183056 (Not mapped)
MLOC_3051.1NoneAvailableNonecontig_1274195 (Not mapped)
MLOC_31617.1NoneAvailableNonecontig_2205597 (Not mapped)
MLOC_34277.1NoneAvailableNonecontig_2431736 (Not mapped)
MLOC_47594.1NoneAvailableNonecontig_308687 (Not mapped)
MLOC_48361.1NoneAvailableNonecontig_322117 (Mapped)
MLOC_62871.1NoneAvailableNonecontig_470503 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----