MLOC_34265 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.434844.9332704.97232
LEAShoots from the seedlings (10 cm shoot stage)02.242155.688714.43424
INF1Young developing inflorescences (5mm)8.8532820.190315.251511.4101
INF2Developing inflorescences (1-1.5 cm)7.088066.301313.87668.82441
ROORoots from the seedlings (10 cm shoot stage)02.5976507.66093
NODDeveloping tillers at six leaf stage, 3rd internode3.329660.8436850.7392433.09914
CAR5Developing grain, bracts removed (5 DPA)2.611153.373903.13678
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_34265






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34265.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34265.1CUST_4828_PI427708083AvailableAvailablecontig_2430773 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g62040.3 -3 9e-22 85 42/44 (95%) 13101.m06632 protein ruvB-like, putative, expressed
TAIR PP10 AT5G22330.1 -3 3e-20 83 41/44 (93%) | Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458