- Predicted Gene MLOC_34265
MLOC_34265 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.43484 | 4.93327 | 0 | 4.97232 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 0 | 2.24215 | 5.68871 | 4.43424 |
INF1 | Young developing inflorescences (5mm) | 8.85328 | 20.1903 | 15.2515 | 11.4101 |
INF2 | Developing inflorescences (1-1.5 cm) | 7.08806 | 6.3013 | 13.8766 | 8.82441 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0 | 2.59765 | 0 | 7.66093 |
NOD | Developing tillers at six leaf stage, 3rd internode | 3.32966 | 0.843685 | 0.739243 | 3.09914 |
CAR5 | Developing grain, bracts removed (5 DPA) | 2.61115 | 3.3739 | 0 | 3.13678 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0 | 0 | 0 | 0 |
CDS Structure of MLOC_34265
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34265.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g62040.3 |
-3 |
9e-22 |
85 |
42/44 (95%) |
13101.m06632 protein ruvB-like, putative, expressed |
TAIR PP10 |
AT5G22330.1 |
-3 |
3e-20 |
83 |
41/44 (93%) |
| Symbols: ATTIP49A, RIN1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr5:7391026-7394071 REVERSE LENGTH=458 |