MLOC_34262 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.552520.119.987624.6824
LEAShoots from the seedlings (10 cm shoot stage)19.979623.375827.240121.1463
INF1Young developing inflorescences (5mm)5.128588.684526.503556.06873
INF2Developing inflorescences (1-1.5 cm)5.46434.29124.79495.47001
ROORoots from the seedlings (10 cm shoot stage)24.131417.38720.363524.6122
NODDeveloping tillers at six leaf stage, 3rd internode29.250127.039233.344490.89
CAR5Developing grain, bracts removed (5 DPA)6.165346.622955.29196.29242
CAR15Developing grain, bracts removed (15 DPA)3.36983.332823.076667.96972



CDS Structure of MLOC_34262






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34262.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356970NoneNoneNoneNone
MLOC_34262.1CUST_2155_PI427708080AvailableAvailablecontig_243068 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g04500.1 +3 8e-80 258 151/242 (62%) 13112.m00431 protein response regulator receiver domain containing protein
TAIR PP10 AT2G41310.1 +3 5e-62 210 102/150 (68%) | Symbols: ATRR3, ARR8, RR3 | response regulator 3 | chr2:17222280-17223536 FORWARD LENGTH=225