- Predicted Gene MLOC_34262
MLOC_34262 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 28.5525 | 20.1 | 19.9876 | 24.6824 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 19.9796 | 23.3758 | 27.2401 | 21.1463 |
INF1 | Young developing inflorescences (5mm) | 5.12858 | 8.68452 | 6.50355 | 6.06873 |
INF2 | Developing inflorescences (1-1.5 cm) | 5.4643 | 4.2912 | 4.7949 | 5.47001 |
ROO | Roots from the seedlings (10 cm shoot stage) | 24.1314 | 17.387 | 20.3635 | 24.6122 |
NOD | Developing tillers at six leaf stage, 3rd internode | 29.2501 | 27.0392 | 33.3444 | 90.89 |
CAR5 | Developing grain, bracts removed (5 DPA) | 6.16534 | 6.62295 | 5.2919 | 6.29242 |
CAR15 | Developing grain, bracts removed (15 DPA) | 3.3698 | 3.33282 | 3.07666 | 7.96972 |
CDS Structure of MLOC_34262
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34262.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os12g04500.1 |
+3 |
8e-80 |
258 |
151/242 (62%) |
13112.m00431 protein response regulator receiver domain containing protein |
TAIR PP10 |
AT2G41310.1 |
+3 |
5e-62 |
210 |
102/150 (68%) |
| Symbols: ATRR3, ARR8, RR3 | response regulator 3 | chr2:17222280-17223536 FORWARD LENGTH=225 |