MLOC_34072 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.166450.14398100.762598
LEAShoots from the seedlings (10 cm shoot stage)0000.0984504
INF1Young developing inflorescences (5mm)0.2278490.1262450.5628730.932856
INF2Developing inflorescences (1-1.5 cm)12.33490.5945894.562518.29251
ROORoots from the seedlings (10 cm shoot stage)00.32066501.04502
NODDeveloping tillers at six leaf stage, 3rd internode1.011670.2100940.3066622.3028
CAR5Developing grain, bracts removed (5 DPA)0.146965001.59086
CAR15Developing grain, bracts removed (15 DPA)0000.73819



CDS Structure of MLOC_34072






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_34072.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_34072.1CUST_4811_PI427708083AvailableAvailablecontig_2422805 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os08g41960.1 +3 1e-27 102 50/57 (88%) 13108.m04510 protein OsMADS37 - MADS-box family gene with MIKC* type-box, expressed
TAIR PP10 AT4G11880.1 +3 3e-21 86 39/56 (70%) | Symbols: AGL14 | AGAMOUS-like 14 | chr4:7143512-7147108 FORWARD LENGTH=221