- Predicted Gene MLOC_34004
MLOC_34004 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 95.9713 | 106.646 | 92.9801 | 111.551 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 53.8894 | 23.217 | 23.9558 | 31.5192 |
| INF1 | Young developing inflorescences (5mm) | 294.181 | 277.256 | 249.11 | 248.417 |
| INF2 | Developing inflorescences (1-1.5 cm) | 200.868 | 208.632 | 194.406 | 242.163 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 38.9502 | 90.4325 | 82.5965 | 118.491 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 1.16339 | 1.1217 | 3.62313 | 6.05968 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 102.409 | 96.5082 | 98.2965 | 108.001 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 17.8784 | 14.7222 | 15.6368 | 39.6353 |
CDS Structure of MLOC_34004
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_34004.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g22880.1 |
-3 |
0.0 |
788 |
430/533 (81%) |
13103.m02766 protein nucleolar protein 5A, putative, expressed |
| TAIR PP10 |
AT3G12860.1 |
-3 |
0.0 |
688 |
341/446 (76%) |
NOP56-like pre RNA processing ribonucleoprotein | chr3:4091678-4093921 FORWARD LENGTH=499 |