MLOC_33942 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains4.885483.9668410.16560
LEAShoots from the seedlings (10 cm shoot stage)10.25475.238353.468120
INF1Young developing inflorescences (5mm)10.947114.686722.01040
INF2Developing inflorescences (1-1.5 cm)10.697816.606719.99380
ROORoots from the seedlings (10 cm shoot stage)1.289143.097928.957010
NODDeveloping tillers at six leaf stage, 3rd internode16.643411.230913.35210
CAR5Developing grain, bracts removed (5 DPA)14.825912.677411.41550
CAR15Developing grain, bracts removed (15 DPA)3.983614.765127.74210



CDS Structure of MLOC_33942






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK356234
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK356234CUST_14032_PI427708083NoneNoneNone
MLOC_25528.2NoneAvailableAvailablecontig_169809 (Mapped)
MLOC_27210.1NoneAvailableNonecontig_1814446 (Not mapped)
MLOC_30319.1NoneAvailableNonecontig_2083633 (Not mapped)
MLOC_30772.1NoneAvailableNonecontig_2124992 (Not mapped)
MLOC_31009.1NoneAvailableNonecontig_2148808 (Mapped)
MLOC_33942.1NoneAvailableNonecontig_2416069 (Not mapped)
MLOC_798.1NoneAvailableNonecontig_1062277 (Mapped)
MLOC_79936.1NoneAvailableNonecontig_877566 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----