MLOC_33910 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.418663.141592.941682.51851
LEAShoots from the seedlings (10 cm shoot stage)3.610921.152121.841961.82169
INF1Young developing inflorescences (5mm)2.074542.314782.936311.79175
INF2Developing inflorescences (1-1.5 cm)2.970613.40083.750783.23342
ROORoots from the seedlings (10 cm shoot stage)1.104591.182171.716841.25675
NODDeveloping tillers at six leaf stage, 3rd internode3.140421.701232.011455.52818
CAR5Developing grain, bracts removed (5 DPA)3.934713.452143.439353.01273
CAR15Developing grain, bracts removed (15 DPA)1.251581.049481.211112.39407



CDS Structure of MLOC_33910






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33910.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33910.1CUST_17641_PI427708080AvailableAvailablecontig_241324 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os01g74480.1 -2 4e-25 108 51/70 (73%) 13101.m08140 protein cupin domain containing protein, expressed
TAIR PP10 AT2G28680.1 -2 1e-17 85 40/67 (60%) RmlC-like cupins superfamily protein | chr2:12303118-12304747 REVERSE LENGTH=356