- Predicted Gene MLOC_33876
MLOC_33876 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 28.4163 | 33.2186 | 31.4593 | 34.8082 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 14.0062 | 1.26827 | 1.03389 | 4.74799 |
| INF1 | Young developing inflorescences (5mm) | 82.6445 | 66.3773 | 45.034 | 59.6197 |
| INF2 | Developing inflorescences (1-1.5 cm) | 54.7846 | 74.5966 | 57.2906 | 77.1264 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 10.0184 | 24.3386 | 21.8266 | 29.5344 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.184762 | 0.162353 | 0.0873543 | 0.532362 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 50.4792 | 47.57 | 39.9441 | 49.8597 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 3.84897 | 2.97372 | 2.91358 | 8.26606 |
CDS Structure of MLOC_33876
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33876.4
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os03g11540.1 |
-3 |
0.0 |
947 |
497/623 (80%) |
13103.m01302 protein RPA1B - Putative single-stranded DNA binding complex subunit 1, expressed |
| TAIR PP10 |
AT5G61000.1 |
-3 |
0.0 |
764 |
397/619 (64%) |
| Symbols: RPA70D, ATRPA70D | Replication factor-A protein 1-related | chr5:24549682-24552641 REVERSE LENGTH=629 |