MLOC_33867 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains17.880532.987317.265827.7655
LEAShoots from the seedlings (10 cm shoot stage)9.184510.7577341.512293.30909
INF1Young developing inflorescences (5mm)63.530169.447166.41464.4962
INF2Developing inflorescences (1-1.5 cm)49.219684.136370.112488.4567
ROORoots from the seedlings (10 cm shoot stage)2.969311.76717.211314.1098
NODDeveloping tillers at six leaf stage, 3rd internode0.5302290.246110.2570750.722564
CAR5Developing grain, bracts removed (5 DPA)33.695344.111122.771238.3157
CAR15Developing grain, bracts removed (15 DPA)2.524811.525821.078834.6291



CDS Structure of MLOC_33867






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33867.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33867.1NoneAvailableAvailablecontig_241013 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g05730.1 -1 2e-32 114 56/59 (95%) 13111.m00557 protein histone H3, putative, expressed
TAIR PP10 AT5G65360.1 -1 1e-32 114 56/59 (95%) Histone superfamily protein | chr5:26120099-26120509 REVERSE LENGTH=136