- Predicted Gene MLOC_33864
MLOC_33864 FPKM values
FPKM by Treatment | FPKM by Replicate |
|
|
Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 55.3454 | 47.4712 | 49.2675 | 40.2495 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 31.7902 | 29.282 | 30.4546 | 21.5856 |
INF1 | Young developing inflorescences (5mm) | 15.3984 | 14.9334 | 14.6456 | 9.89282 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.8996 | 12.0881 | 9.98776 | 10.3626 |
ROO | Roots from the seedlings (10 cm shoot stage) | 24.7163 | 26.5666 | 31.3573 | 26.3292 |
NOD | Developing tillers at six leaf stage, 3rd internode | 42.884 | 36.2972 | 26.9828 | 95.8573 |
CAR5 | Developing grain, bracts removed (5 DPA) | 19.4582 | 22.3669 | 22.7195 | 17.0238 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.78456 | 4.37503 | 4.30322 | 9.08074 |
CDS Structure of MLOC_33864
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33864.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os01g40470.1 |
+2 |
3e-22 |
94 |
46/55 (84%) |
13101.m04144 protein vacuolar ATP synthase subunit d, putative, expressed |
TAIR PP10 |
AT3G28715.2 |
+2 |
2e-21 |
91 |
43/55 (78%) |
ATPase, V0/A0 complex, subunit C/D | chr3:10778025-10780350 FORWARD LENGTH=343 |