MLOC_33861 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains3.846796.1455.509925.443
LEAShoots from the seedlings (10 cm shoot stage)6.284476.951646.700455.84244
INF1Young developing inflorescences (5mm)7.174358.9201410.25947.29317
INF2Developing inflorescences (1-1.5 cm)11.607111.543313.316512.8299
ROORoots from the seedlings (10 cm shoot stage)6.8485310.5928.241912.2077
NODDeveloping tillers at six leaf stage, 3rd internode8.32159.74417.9669533.4147
CAR5Developing grain, bracts removed (5 DPA)8.160136.899486.596576.84022
CAR15Developing grain, bracts removed (15 DPA)7.351966.347086.1272415.0853



CDS Structure of MLOC_33861






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33861.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33861.1CUST_11103_PI427708080AvailableAvailablecontig_240982 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os11g40590.3 +2 0.0 1005 545/859 (63%) 13111.m04022 protein DUF1399 containing protein, putative, expressed
TAIR PP10 AT4G37900.1 +2 8e-176 536 297/676 (44%) Protein of unknown function (duplicated DUF1399) | chr4:17821737-17824445 REVERSE LENGTH=787