MLOC_33833 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains278.157261.832255.456286.566
LEAShoots from the seedlings (10 cm shoot stage)230.411150.369143.927152.323
INF1Young developing inflorescences (5mm)147.379150.858153.848138.074
INF2Developing inflorescences (1-1.5 cm)142.617117.649139.185155.087
ROORoots from the seedlings (10 cm shoot stage)356.962314.643368.34421.715
NODDeveloping tillers at six leaf stage, 3rd internode378.392326.693187.4321003.53
CAR5Developing grain, bracts removed (5 DPA)183.723192.286180.363200.787
CAR15Developing grain, bracts removed (15 DPA)93.2293102.1995.7313249.157



CDS Structure of MLOC_33833






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33833.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK250232.1NoneNoneNoneNone
MLOC_33833.1CUST_2147_PI427708080AvailableAvailablecontig_240625 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g41060.1 +2 3e-125 366 181/181 (100%) 13105.m04350 protein ADP-ribosylation factor, putative, expressed
TAIR PP10 AT3G62290.3 +2 5e-123 359 177/181 (98%) | Symbols: ARFA1E | ADP-ribosylation factor A1E | chr3:23052287-23053545 FORWARD LENGTH=181