MLOC_33676 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.433392.196852.052711.60834
LEAShoots from the seedlings (10 cm shoot stage)2.360361.865792.187761.61682
INF1Young developing inflorescences (5mm)4.539964.598934.726943.14865
INF2Developing inflorescences (1-1.5 cm)7.817356.544765.961526.22016
ROORoots from the seedlings (10 cm shoot stage)0.965221.641631.542651.51242
NODDeveloping tillers at six leaf stage, 3rd internode1.231792.291851.602376.37919
CAR5Developing grain, bracts removed (5 DPA)3.968073.299494.473473.0259
CAR15Developing grain, bracts removed (15 DPA)1.626631.877421.808763.07926



CDS Structure of MLOC_33676






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33676.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33676.1NoneAvailableAvailablecontig_239418 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g09089.2 -3 7e-18 89 41/54 (76%) 13112.m00965 protein protein kinase PKN/PRK1, effector, putative, expressed
TAIR PP10None-----