- Predicted Gene MLOC_33653
MLOC_33653 FPKM values
| FPKM by Treatment | FPKM by Replicate |

| 
|
| Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
|---|
| EMB | 4-day embryos dissected from germinating grains | 19.5064 | 24.3777 | 28.1927 | 30.5385 |
| LEA | Shoots from the seedlings (10 cm shoot stage) | 5.56312 | 1.03985 | 1.82802 | 2.94744 |
| INF1 | Young developing inflorescences (5mm) | 59.6586 | 49.7685 | 48.0986 | 54.124 |
| INF2 | Developing inflorescences (1-1.5 cm) | 40.0201 | 30.937 | 26.4927 | 43.0386 |
| ROO | Roots from the seedlings (10 cm shoot stage) | 6.80028 | 8.16644 | 14.5787 | 14.1007 |
| NOD | Developing tillers at six leaf stage, 3rd internode | 0.450627 | 0.360611 | 0.66156 | 1.90227 |
| CAR5 | Developing grain, bracts removed (5 DPA) | 19.7448 | 17.0029 | 21.6811 | 22.7334 |
| CAR15 | Developing grain, bracts removed (15 DPA) | 2.27547 | 1.62939 | 0.767114 | 4.84461 |
CDS Structure of MLOC_33653
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33653.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
| Database | Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Rice PP6 |
LOC_Os02g56130.1 |
+2 |
3e-31 |
112 |
57/62 (92%) |
13102.m06448 protein PCNA - Putative DNA replicative polymerase clamp, expressed |
| TAIR PP10 |
AT1G07370.1 |
+2 |
9e-30 |
107 |
54/62 (87%) |
| Symbols: PCNA1, ATPCNA1 | proliferating cellular nuclear antigen 1 | chr1:2263204-2264382 FORWARD LENGTH=263 |