MLOC_33625 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.157393.463353.02581.83059
LEAShoots from the seedlings (10 cm shoot stage)5.030556.771186.58953.23558
INF1Young developing inflorescences (5mm)8.034018.5528412.78094.75446
INF2Developing inflorescences (1-1.5 cm)15.363817.429215.686511.8516
ROORoots from the seedlings (10 cm shoot stage)0.7498742.074361.782091.24827
NODDeveloping tillers at six leaf stage, 3rd internode1.672752.754051.887185.3625
CAR5Developing grain, bracts removed (5 DPA)10.445711.625611.75436.80776
CAR15Developing grain, bracts removed (15 DPA)3.689953.152463.640795.0689



CDS Structure of MLOC_33625






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33625.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33625.2CUST_12113_PI427708083AvailableAvailablecontig_239047 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os03g07110.3 -1 4e-16 83 38/50 (76%) 13103.m00785 protein calmodulin-binding protein, putative, expressed
TAIR PP10None-----