MLOC_33500 FPKM values

FPKM by TreatmentFPKM by Replicate
There are no FPKM-by-treatment values calculated for this gene.


Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains2.2992800.760670
LEAShoots from the seedlings (10 cm shoot stage)001.516910
INF1Young developing inflorescences (5mm)0.5020274.004941.228230
INF2Developing inflorescences (1-1.5 cm)2.201471.554111.144050
ROORoots from the seedlings (10 cm shoot stage)0.9759120.50859200
NODDeveloping tillers at six leaf stage, 3rd internode1.697953.8151.596510
CAR5Developing grain, bracts removed (5 DPA)1.065580.47704200
CAR15Developing grain, bracts removed (15 DPA)0000



CDS Structure of MLOC_33500






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by AK252526.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK252526.1NoneNoneNoneNone
MLOC_27125.1NoneAvailableNonecontig_1807998 (Not mapped)
MLOC_33500.1NoneAvailableNonecontig_2379171 (Not mapped)
MLOC_47438.1NoneAvailableAvailablecontig_306081 (Mapped)
MLOC_47582.1NoneAvailableNonecontig_308503 (Mapped)
MLOC_55578.1NoneAvailableNonecontig_400796 (Mapped)
MLOC_63216.1NoneAvailableNonecontig_474007 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6None-----
TAIR PP10None-----