MLOC_33482 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains46.389747.227746.770447.7632
LEAShoots from the seedlings (10 cm shoot stage)26.05614.304868.5441711.6636
INF1Young developing inflorescences (5mm)41.574546.593941.500537.4182
INF2Developing inflorescences (1-1.5 cm)19.990715.533615.377318.6294
ROORoots from the seedlings (10 cm shoot stage)37.149434.327734.831443.1175
NODDeveloping tillers at six leaf stage, 3rd internode23.22433.996650.70889912.171
CAR5Developing grain, bracts removed (5 DPA)2.185382.198493.655442.56318
CAR15Developing grain, bracts removed (15 DPA)1.91182.061781.946744.66191



CDS Structure of MLOC_33482






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33482.2
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
AK249194.1NoneNoneNoneNone
MLOC_33482.2CUST_17987_PI427708080AvailableAvailablecontig_235453 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os05g02310.1 +1 3e-137 397 193/213 (91%) 13105.m00195 protein soluble inorganic pyrophosphatase, putative, expressed
TAIR PP10 AT3G53620.1 +1 4e-123 360 174/213 (82%) | Symbols: AtPPa4, PPa4 | pyrophosphorylase 4 | chr3:19881491-19883308 FORWARD LENGTH=216