- Predicted Gene MLOC_33460
MLOC_33460 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_33460_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_33460_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 39.6991 | 28.6858 | 44.3833 | 36.2238 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 30.0435 | 20.4196 | 22.4205 | 20.9758 |
INF1 | Young developing inflorescences (5mm) | 46.1506 | 46.2935 | 46.3061 | 41.2493 |
INF2 | Developing inflorescences (1-1.5 cm) | 31.569 | 49.8914 | 46.6655 | 49.4127 |
ROO | Roots from the seedlings (10 cm shoot stage) | 30.281 | 36.8148 | 43.8874 | 43.7787 |
NOD | Developing tillers at six leaf stage, 3rd internode | 33.0951 | 22.1026 | 13.7053 | 57.5262 |
CAR5 | Developing grain, bracts removed (5 DPA) | 69.5183 | 61.5083 | 86.3361 | 74.4673 |
CAR15 | Developing grain, bracts removed (15 DPA) | 22.192 | 18.8444 | 21.2517 | 52.4494 |
CDS Structure of MLOC_33460
Members of Gene Cluster
This cluster has a confidence assignment of
non-High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33460.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g21970.1 |
-1 |
6e-64 |
208 |
106/112 (95%) |
13102.m02462 protein 26S protease regulatory subunit 6B, putative, expressed |
TAIR PP10 |
AT5G58290.1 |
-1 |
2e-60 |
197 |
101/114 (89%) |
| Symbols: RPT3 | regulatory particle triple-A ATPase 3 | chr5:23569155-23571116 FORWARD LENGTH=408 |