MLOC_33440 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains6.55286.073557.581466.94536
LEAShoots from the seedlings (10 cm shoot stage)17.217420.525721.956518.0991
INF1Young developing inflorescences (5mm)10.191514.798416.989611.4933
INF2Developing inflorescences (1-1.5 cm)14.776418.083712.690417.9892
ROORoots from the seedlings (10 cm shoot stage)1.850983.504731.073934.40064
NODDeveloping tillers at six leaf stage, 3rd internode13.281825.062123.235793.4728
CAR5Developing grain, bracts removed (5 DPA)8.8010110.00557.693879.16936
CAR15Developing grain, bracts removed (15 DPA)1.985010.4782492.528763.96124



CDS Structure of MLOC_33440






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33440.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33440.1CUST_11056_PI427708080AvailableAvailablecontig_2373783 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os12g35190.1 +2 4e-20 85 57/131 (44%) 13112.m03600 protein transposon protein, putative, CACTA, En/Spm sub-class
TAIR PP10None-----