- Predicted Gene MLOC_33439
MLOC_33439 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_33439_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_33439_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 0.969193 | 0.93366 | 0.850443 | 0.961103 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 2.2274 | 0.406611 | 0.925026 | 0.977183 |
INF1 | Young developing inflorescences (5mm) | 1.52571 | 1.38983 | 0.82761 | 1.18145 |
INF2 | Developing inflorescences (1-1.5 cm) | 1.69342 | 2.22261 | 2.3472 | 2.58337 |
ROO | Roots from the seedlings (10 cm shoot stage) | 2.24863 | 3.11908 | 3.91589 | 3.74886 |
NOD | Developing tillers at six leaf stage, 3rd internode | 7.45467 | 6.60015 | 1.94496 | 15.9362 |
CAR5 | Developing grain, bracts removed (5 DPA) | 3.24917 | 2.45769 | 2.50407 | 2.98013 |
CAR15 | Developing grain, bracts removed (15 DPA) | 0.0769347 | 0.0300209 | 0.0920449 | 0.168262 |
CDS Structure of MLOC_33439
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33439.1
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os04g57800.1 |
+3 |
0.0 |
550 |
371/575 (65%) |
13104.m06062 protein BTBN13 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with non-phototropic hypocotyl 3 NPH3 and coiled-coil domains, expressed |
TAIR PP10 |
AT3G19850.1 |
+3 |
7e-96 |
312 |
219/552 (40%) |
Phototropic-responsive NPH3 family protein | chr3:6898383-6901157 REVERSE LENGTH=554 |