MLOC_3335 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_3335_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_3335_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
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EMB | 4-day embryos dissected from germinating grains | 8.61381 | 17.8907 | 15.8416 | 15.6855 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 12.9552 | 18.7816 | 13.8456 | 13.9301 |
INF1 | Young developing inflorescences (5mm) | 30.7508 | 29.1688 | 24.4753 | 23.9429 |
INF2 | Developing inflorescences (1-1.5 cm) | 34.4357 | 37.6937 | 35.0536 | 40.607 |
ROO | Roots from the seedlings (10 cm shoot stage) | 7.11292 | 15.0675 | 12.5814 | 18.7487 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.05445 | 6.56419 | 8.77398 | 27.1485 |
CAR5 | Developing grain, bracts removed (5 DPA) | 40.6381 | 39.6447 | 42.8388 | 42.1027 |
CAR15 | Developing grain, bracts removed (15 DPA) | 5.38195 | 6.67516 | 5.94435 | 13.325 |
CDS Structure of MLOC_3335
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_3335.2
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os02g39550.2 |
-1 |
0.0 |
1036 |
664/755 (88%) |
13102.m04378 protein calcium-binding mitochondrial protein anon-60Da, putative, expressed |
TAIR PP10 |
AT1G65540.1 |
-1 |
0.0 |
742 |
491/756 (65%) |
LETM1-like protein | chr1:24362382-24366011 REVERSE LENGTH=736 |