- Predicted Gene MLOC_33258
MLOC_33258 FPKM values
FPKM by Treatment | FPKM by Replicate |
![](/morexGenes/blast_net_images/MLOC_33258_assembly3_WGSMorex_rbca.fasta_treatments.fpkms.png)
| ![](/morexGenes/blast_net_images/MLOC_33258_assembly3_WGSMorex_rbca.fasta_replicates.fpkms.png)
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Treatment ID | Treatment Description | Rep 1 FPKM | Rep 2 FPKM | Rep 3 FPKM | Treatment FPKM |
---|
EMB | 4-day embryos dissected from germinating grains | 1.6667 | 3.04571 | 3.28468 | 2.87487 |
LEA | Shoots from the seedlings (10 cm shoot stage) | 7.81513 | 8.48132 | 6.68946 | 7.06651 |
INF1 | Young developing inflorescences (5mm) | 5.96199 | 5.52582 | 9.38823 | 5.73546 |
INF2 | Developing inflorescences (1-1.5 cm) | 10.8557 | 8.05781 | 9.53417 | 10.5304 |
ROO | Roots from the seedlings (10 cm shoot stage) | 0.859416 | 2.52609 | 1.73582 | 2.99171 |
NOD | Developing tillers at six leaf stage, 3rd internode | 6.02207 | 7.1557 | 10.3602 | 28.9866 |
CAR5 | Developing grain, bracts removed (5 DPA) | 5.34722 | 4.17957 | 4.66808 | 4.76899 |
CAR15 | Developing grain, bracts removed (15 DPA) | 1.50767 | 1.73913 | 1.20552 | 3.58142 |
CDS Structure of MLOC_33258
Members of Gene Cluster
This cluster has a confidence assignment of
High Confidence.
The gene has a transcript that is part of a cluster represented by
MLOC_33258.3
Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)
Database | Hit | Frame | E-value | Score | % Identity | Description |
---|
Rice PP6 |
LOC_Os07g46900.1 |
+1 |
9e-85 |
260 |
125/288 (43%) |
13107.m04970 protein transposon protein, putative, unclassified, expressed |
TAIR PP10 |
AT4G38180.1 |
+1 |
1e-29 |
126 |
75/286 (26%) |
| Symbols: FRS5 | FAR1-related sequence 5 | chr4:17906702-17909404 REVERSE LENGTH=788 |