MLOC_33254 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains1.96331.937750.9000391.33868
LEAShoots from the seedlings (10 cm shoot stage)1.157471.036672.894173.49231
INF1Young developing inflorescences (5mm)1.555490.9653812.60713.98541
INF2Developing inflorescences (1-1.5 cm)2.254572.543612.735937.03084
ROORoots from the seedlings (10 cm shoot stage)0.0001467530.57664602.66775
NODDeveloping tillers at six leaf stage, 3rd internode0.8733090.2486250.6130196.45519
CAR5Developing grain, bracts removed (5 DPA)1.07850.4126161.384962.76637
CAR15Developing grain, bracts removed (15 DPA)0.7258140.335441.351273.35808



CDS Structure of MLOC_33254






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33254.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33254.1CUST_12102_PI427708083AvailableAvailablecontig_2357452 (Not mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g16950.5 +3 6e-18 79 35/45 (78%) 13107.m01773 protein Mak16 protein domain containing protein, expressed
TAIR PP10None-----