MLOC_33247 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains0.4385390.1903650.3726610.428983
LEAShoots from the seedlings (10 cm shoot stage)0.1091360.2360590.2101610.285657
INF1Young developing inflorescences (5mm)0.4677250.187560.5973190.526552
INF2Developing inflorescences (1-1.5 cm)0.9052920.6385851.095411.26978
ROORoots from the seedlings (10 cm shoot stage)00.34056300.939306
NODDeveloping tillers at six leaf stage, 3rd internode0.05279050.419390.2925921.74405
CAR5Developing grain, bracts removed (5 DPA)0.06371890.2923050.06647280.34598
CAR15Developing grain, bracts removed (15 DPA)0.058555500.08648210.392508



CDS Structure of MLOC_33247






Members of Gene Cluster

This cluster has a confidence assignment of non-High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33247.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33247.1CUST_4697_PI427708083AvailableAvailablecontig_235704 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os02g17500.3 +2 1e-11 65 31/34 (91%) 13102.m01956 protein transporter family protein, putative, expressed
TAIR PP10None-----