MLOC_33244 FPKM values

FPKM by TreatmentFPKM by Replicate





Treatment IDTreatment DescriptionRep 1 FPKMRep 2 FPKMRep 3 FPKMTreatment FPKM
EMB4-day embryos dissected from germinating grains28.181727.324.038128.2307
LEAShoots from the seedlings (10 cm shoot stage)1.817246.28080.8246862.58613
INF1Young developing inflorescences (5mm)00.07856220.08518510.174226
INF2Developing inflorescences (1-1.5 cm)00.06844290.1721950.190037
ROORoots from the seedlings (10 cm shoot stage)13.53086.1166512.96329.56504
NODDeveloping tillers at six leaf stage, 3rd internode00.034224700.257378
CAR5Developing grain, bracts removed (5 DPA)2.615161.864271.496592.19316
CAR15Developing grain, bracts removed (15 DPA)0.1783150.067673100.438887



CDS Structure of MLOC_33244






Members of Gene Cluster

This cluster has a confidence assignment of High Confidence.

The gene has a transcript that is part of a cluster represented by MLOC_33244.1
Cluster memberProbe IDFPKM by replicateFPKM by treatmentSource Contig
MLOC_33244.1CUST_11034_PI427708080AvailableAvailablecontig_235676 (Mapped)




Homology of Longest Transcript to Model Species (BLASTX to E-value < 1e-50)

DatabaseHitFrameE-valueScore% IdentityDescription
Rice PP6 LOC_Os07g47450.1 -1 8e-41 137 71/107 (66%) 13107.m05050 protein flowering promoting factor-like 1, putative, expressed
TAIR PP10 AT5G24860.1 -1 4e-21 86 48/104 (46%) | Symbols: FPF1, ATFPF1 | flowering promoting factor 1 | chr5:8541822-8542154 FORWARD LENGTH=110